CWL Questions


Topic Replies Activity
About the CWL Questions category 1 August 8, 2019
How to iterate over input file array from arguments -> valueFrom 1 February 22, 2020
Variable output file types 3 February 13, 2020
Failed to create directory in the default staging directory inside Docker 2 February 13, 2020
Ask CWL to rename a secondary file 4 February 11, 2020
Proper syntax for type paths 3 February 11, 2020
How to remove a file in the input directory? 5 January 28, 2020
Scatter workflow step n times 4 December 17, 2019
Running with toil cwl how to interpret the stats? 7 November 19, 2019
Passing reference or whole directory as input? 3 November 4, 2019
Create/Move output of a tool to a specific location 9 November 3, 2019
Issues with running the workflow with toil-cwl-runner but not with cwltool 3 October 31, 2019
How can I expression an optional record with required fields 4 October 28, 2019
Does a listing support arrays of arrays? 8 October 24, 2019
Apply basename to an array on input file 2 October 24, 2019
Output in the format of an input schema 2 October 16, 2019
Default in workflow and subworkflow 2 September 21, 2019
Dependent inputs in a workflow 2 September 3, 2019
Creating a temporary directory at runtime 2 August 22, 2019
Combine multiple output directories 2 August 15, 2019
Pass writeable output directory to a tool 15 August 12, 2019