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About the CWL Questions category
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0
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548
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August 8, 2019
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Docker tool not found but is present in the system
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3
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46
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January 15, 2026
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Complex workflow cannot be packed
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3
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46
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October 26, 2025
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How does ResourceRequirement work?
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5
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127
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October 23, 2025
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Output files not next to each other in next step
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5
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36
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October 23, 2025
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Is it possible to always pull latest Docker image?
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3
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50
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September 22, 2025
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CUDARequirement validation error with latest cwltool
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1
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44
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September 12, 2025
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Monitoring execution of CWL Workflows?
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0
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64
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July 8, 2025
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Best Practices for Avoiding "Argument List Too Long" in Large-Scale Workflows
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1
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32
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July 7, 2025
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Difficulty using fgbio with CWL
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2
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44
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June 10, 2025
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Sample Sheets and the dynamic creation of Files
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1
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70
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May 19, 2025
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Best practice metadata and attribution
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2
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73
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April 24, 2025
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Scattering doesn't work
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1
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54
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March 25, 2025
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Input wrapped in double quotes getting wrapped in single quotes
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4
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63
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March 5, 2025
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Cwltool: resolve conda dependencies with local mirror
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13
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94
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February 27, 2025
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Extending RecordSchemas?
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0
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46
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February 18, 2025
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Insert global parameters before a subcommand argument
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3
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48
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February 5, 2025
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How to invoke GPU Docker usage
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1
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56
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January 24, 2025
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Validation does not catch missing inputs in conditional expression
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0
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41
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January 22, 2025
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Grouping outputs into separate directories
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0
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46
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December 10, 2024
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Loading missing://
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2
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36
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December 4, 2024
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Use inline javascript when specifying input string
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5
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47
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December 3, 2024
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"Singularity exec" vs "docker run"
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6
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105
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November 12, 2024
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How to gather output files from subdirectories
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1
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47
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November 11, 2024
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How to run a bash command within a tool?
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3
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87
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November 5, 2024
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How to use arrays as input
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3
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65
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November 5, 2024
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Using a local Dockerfile based on renv.lock
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1
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52
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November 5, 2024
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Cwltool/provenance worfklow.cwl#main vs workflow.cwl
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0
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30
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September 2, 2024
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ExpressionTools loadContents how to load from array
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0
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40
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August 29, 2024
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How to use the Docker installed libraries in a cwl workflow?
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4
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60
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August 19, 2024
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