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About the CWL Questions category
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0
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113
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August 8, 2019
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dockerFile contents vs dockerFile...file
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4
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110
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April 12, 2021
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Forcing stdout and stderr to be written when a tool fails
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6
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29
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April 9, 2021
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Using floats / decimals as integers in a workflow and vice versa
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3
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44
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March 30, 2021
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CWL input files as secondaryFiles JS
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1
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41
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March 22, 2021
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Submit job on remote cluster
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6
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47
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March 5, 2021
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Secondary files cannot be collected by cwltool on Windows 10
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2
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176
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March 5, 2021
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dockerImageId can not be known before dockerFile build
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1
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99
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March 5, 2021
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Singularity temp folder
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1
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61
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March 5, 2021
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Cwl-runner vs cromwell run : Different outputs behavior
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1
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26
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March 5, 2021
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dockerPull : hostname and port?
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1
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28
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March 5, 2021
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How to specify a list of directory in InputWorkDirRequirement
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2
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33
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March 5, 2021
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Dealing with huge inputs in CWL for an AI use case
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4
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71
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March 5, 2021
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Working offline with singularity
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14
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173
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March 5, 2021
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Error trying to create input from array of records with secondary files
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5
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51
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March 5, 2021
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What is the best way to ingest a directory of FASTQ paired-end files
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1
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36
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March 5, 2021
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Unable to retain cache/tmp dir
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1
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32
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March 2, 2021
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Building CWL tool for FindBadGenomicKmers
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2
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116
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February 26, 2021
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Gather file array into one argument in CommandlineTool
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1
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31
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February 26, 2021
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Array arguments appears differently between cwl-runner and cromwell, why?
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1
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37
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February 26, 2021
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Generating array parameters for scatter
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1
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36
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February 26, 2021
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Scatter parameter error?
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1
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32
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February 22, 2021
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CommandOutputParameter - regex
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4
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55
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February 16, 2021
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Inter steps output dependencies difficulties
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8
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54
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February 15, 2021
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CommandOutputParameter - mathematical evaluation and assignment
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2
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36
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February 15, 2021
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WorkflowStepInput - calculation and assignment
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1
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43
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February 15, 2021
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Input and output paths not explicitly provided in CWL for an AI use case
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6
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59
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February 15, 2021
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Forming multiple arguments via "arguments:"
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2
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41
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February 11, 2021
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Handling output with full path?
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2
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38
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February 11, 2021
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Generated CWL file fails validation
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1
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32
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February 11, 2021
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