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About the CWL Questions category
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0
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197
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August 8, 2019
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Extract File + SecondaryFiles by ExpressionTool
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1
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32
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November 24, 2021
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Can't find asdf python installation
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2
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31
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November 16, 2021
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Singularity not found but installed
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1
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36
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November 12, 2021
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Deferred input for scattered subworkflow?
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2
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65
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November 12, 2021
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$include instead of $import for run:?
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1
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34
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November 11, 2021
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Connect path output (from a tool stdout) to a File input
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3
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81
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October 28, 2021
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ERROR Tool definition failed validation
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1
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35
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October 18, 2021
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Intermediary outputs are not deleted after workflow completion
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3
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102
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October 18, 2021
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Best practice for passing in credentials/secrets to docker container
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2
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80
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October 18, 2021
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DockerRequirement vs ContainerRequirement
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2
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66
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October 7, 2021
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Using `Directory` as an output type
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1
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60
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October 7, 2021
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Docker: Error response from daemon: invalid mount config for type "bind": bind source path does not exist: /tmp/n8phn0ef
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1
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75
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October 4, 2021
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Cwl-runner - tmpdir not deleted
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9
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258
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October 3, 2021
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Running steps conditional on output files not existing
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2
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95
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October 2, 2021
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Working offline with singularity
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18
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522
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September 30, 2021
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How do you import a remote document using https?
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2
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65
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September 30, 2021
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Relative file hierarchy not preserved with respect to cwltool "--outdir"
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2
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65
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September 28, 2021
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Interactive CWL workflows (e.g. pop-up to ask user as a step)
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1
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49
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September 27, 2021
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Problems with Records not behaving as intended or passing to baseCommand
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11
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119
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September 22, 2021
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Custom docker invocation
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1
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57
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September 20, 2021
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Cwl-runner and podman
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7
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374
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September 10, 2021
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Could it happen that a cwl created in a different editor is not correctly parsed in rabix composer?
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1
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46
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September 8, 2021
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Specifying a relative directory for all outputs
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1
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74
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September 7, 2021
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Creating the scatter array using inputs
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2
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89
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September 7, 2021
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Scatter workflow: Calling cwl actors sequentially rather than when sufficient input is present
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1
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41
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September 6, 2021
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Error Handling For a Scatter Workflow
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1
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47
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September 6, 2021
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How to pass options to Docker/Singularity?
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5
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104
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September 6, 2021
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Type casting and binding in the cwl:in in nested workflows
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4
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54
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September 2, 2021
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Cwl with python and python pip requirements
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3
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108
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August 25, 2021
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