|
About the CWL Questions category
|
|
0
|
553
|
August 8, 2019
|
|
Attempting to stage multiple files into a directory
|
|
4
|
41
|
April 2, 2026
|
|
Using type from packed tool
|
|
0
|
25
|
March 30, 2026
|
|
Tool 'activate'
|
|
3
|
50
|
March 25, 2026
|
|
Idn2 not working when used as baseCommand
|
|
2
|
32
|
March 6, 2026
|
|
Default value for a `type: File` with `secondaryFiles`
|
|
2
|
46
|
February 18, 2026
|
|
Developer Contributing Guide
|
|
1
|
33
|
February 18, 2026
|
|
Constructing a default value for a tool input
|
|
4
|
1899
|
June 28, 2020
|
|
Docker tool not found but is present in the system
|
|
3
|
80
|
January 15, 2026
|
|
Complex workflow cannot be packed
|
|
3
|
87
|
October 26, 2025
|
|
How does ResourceRequirement work?
|
|
5
|
206
|
October 23, 2025
|
|
Output files not next to each other in next step
|
|
5
|
59
|
October 23, 2025
|
|
Is it possible to always pull latest Docker image?
|
|
3
|
99
|
September 22, 2025
|
|
CUDARequirement validation error with latest cwltool
|
|
1
|
70
|
September 12, 2025
|
|
Monitoring execution of CWL Workflows?
|
|
0
|
82
|
July 8, 2025
|
|
Best Practices for Avoiding "Argument List Too Long" in Large-Scale Workflows
|
|
1
|
60
|
July 7, 2025
|
|
Difficulty using fgbio with CWL
|
|
2
|
70
|
June 10, 2025
|
|
Sample Sheets and the dynamic creation of Files
|
|
1
|
100
|
May 19, 2025
|
|
Best practice metadata and attribution
|
|
2
|
110
|
April 24, 2025
|
|
Scattering doesn't work
|
|
1
|
81
|
March 25, 2025
|
|
Input wrapped in double quotes getting wrapped in single quotes
|
|
4
|
95
|
March 5, 2025
|
|
Cwltool: resolve conda dependencies with local mirror
|
|
13
|
198
|
February 27, 2025
|
|
Extending RecordSchemas?
|
|
0
|
64
|
February 18, 2025
|
|
Insert global parameters before a subcommand argument
|
|
3
|
97
|
February 5, 2025
|
|
How to invoke GPU Docker usage
|
|
1
|
76
|
January 24, 2025
|
|
Validation does not catch missing inputs in conditional expression
|
|
0
|
51
|
January 22, 2025
|
|
Grouping outputs into separate directories
|
|
0
|
58
|
December 10, 2024
|
|
Loading missing://
|
|
2
|
56
|
December 4, 2024
|
|
Use inline javascript when specifying input string
|
|
5
|
71
|
December 3, 2024
|
|
"Singularity exec" vs "docker run"
|
|
6
|
155
|
November 12, 2024
|