|
About the CWL Questions category
|
|
0
|
548
|
August 8, 2019
|
|
Complex workflow cannot be packed
|
|
3
|
43
|
October 26, 2025
|
|
How does ResourceRequirement work?
|
|
5
|
111
|
October 23, 2025
|
|
Output files not next to each other in next step
|
|
5
|
33
|
October 23, 2025
|
|
Is it possible to always pull latest Docker image?
|
|
3
|
48
|
September 22, 2025
|
|
CUDARequirement validation error with latest cwltool
|
|
1
|
34
|
September 12, 2025
|
|
Monitoring execution of CWL Workflows?
|
|
0
|
59
|
July 8, 2025
|
|
Best Practices for Avoiding "Argument List Too Long" in Large-Scale Workflows
|
|
1
|
29
|
July 7, 2025
|
|
Difficulty using fgbio with CWL
|
|
2
|
35
|
June 10, 2025
|
|
Sample Sheets and the dynamic creation of Files
|
|
1
|
68
|
May 19, 2025
|
|
Best practice metadata and attribution
|
|
2
|
65
|
April 24, 2025
|
|
Scattering doesn't work
|
|
1
|
47
|
March 25, 2025
|
|
Input wrapped in double quotes getting wrapped in single quotes
|
|
4
|
61
|
March 5, 2025
|
|
Cwltool: resolve conda dependencies with local mirror
|
|
13
|
77
|
February 27, 2025
|
|
Extending RecordSchemas?
|
|
0
|
43
|
February 18, 2025
|
|
Insert global parameters before a subcommand argument
|
|
3
|
41
|
February 5, 2025
|
|
How to invoke GPU Docker usage
|
|
1
|
52
|
January 24, 2025
|
|
Validation does not catch missing inputs in conditional expression
|
|
0
|
35
|
January 22, 2025
|
|
Docker tool not found but is present in the system
|
|
0
|
40
|
January 4, 2025
|
|
Grouping outputs into separate directories
|
|
0
|
41
|
December 10, 2024
|
|
Loading missing://
|
|
2
|
31
|
December 4, 2024
|
|
Use inline javascript when specifying input string
|
|
5
|
46
|
December 3, 2024
|
|
"Singularity exec" vs "docker run"
|
|
6
|
91
|
November 12, 2024
|
|
How to gather output files from subdirectories
|
|
1
|
44
|
November 11, 2024
|
|
How to run a bash command within a tool?
|
|
3
|
69
|
November 5, 2024
|
|
How to use arrays as input
|
|
3
|
65
|
November 5, 2024
|
|
Using a local Dockerfile based on renv.lock
|
|
1
|
45
|
November 5, 2024
|
|
Cwltool/provenance worfklow.cwl#main vs workflow.cwl
|
|
0
|
30
|
September 2, 2024
|
|
ExpressionTools loadContents how to load from array
|
|
0
|
40
|
August 29, 2024
|
|
How to use the Docker installed libraries in a cwl workflow?
|
|
4
|
54
|
August 19, 2024
|