|
Collect input files by name from directories
|
|
0
|
30
|
July 3, 2024
|
|
.cwl workflow find file in subdirectories of an input directory
|
|
7
|
614
|
July 3, 2024
|
|
How to get input name from a tool parsed using `cwl_utils.parser.load_document_by_uri`
|
|
2
|
170
|
July 1, 2024
|
|
Cwltool uses docker --mounts
|
|
1
|
133
|
July 1, 2024
|
|
CWL - specifying Directory outputs as an input
|
|
13
|
3245
|
May 15, 2024
|
|
How to have configure secondaryFiles to recognize two different patterns for the same file
|
|
2
|
492
|
May 18, 2024
|
|
Example CWL FastAPI execution in Python
|
|
2
|
150
|
May 18, 2024
|
|
CPU allocation from Slurm
|
|
4
|
233
|
May 13, 2024
|
|
Creating config JSON file from a record
|
|
3
|
1071
|
March 19, 2024
|
|
How to fail-fast during parallel scatter
|
|
4
|
365
|
February 4, 2024
|
|
Parallel execution of tasks. Is there a limit?
|
|
3
|
456
|
February 2, 2024
|
|
How adapted to batch analysis is CWL?
|
|
2
|
266
|
January 16, 2024
|
|
Cwltool.main text arguments a hard requirement for provenance?
|
|
2
|
297
|
January 13, 2024
|
|
How to use CUDARequirement?
|
|
2
|
359
|
January 8, 2024
|
|
Running docker from a CommandLineTool
|
|
3
|
603
|
January 5, 2024
|
|
Build full command with CWL parsing
|
|
4
|
254
|
January 4, 2024
|
|
dockerFile contents vs dockerFile...file
|
|
6
|
937
|
December 16, 2023
|
|
Specifying custom hints for specific workflow engines
|
|
5
|
429
|
December 13, 2023
|
|
Using schema.org attributes to define compatible workflow engines
|
|
5
|
459
|
December 8, 2023
|
|
Validation of expressions given input sections
|
|
1
|
304
|
November 11, 2023
|
|
Forming multiple arguments via "arguments:"
|
|
3
|
756
|
October 10, 2023
|
|
CWL workflow using ncbi sra tool kit fails
|
|
12
|
611
|
October 6, 2023
|
|
Passing numeric values in workflow
|
|
2
|
420
|
September 25, 2023
|
|
Confuse on changelog v1.2 on loadContents
|
|
2
|
362
|
September 22, 2023
|
|
Using python instead of javascript
|
|
1
|
388
|
September 20, 2023
|
|
Tidiest way to specify heterogeneous listing logic
|
|
1
|
611
|
September 20, 2023
|
|
automatically start the process from the last failed step?
|
|
1
|
410
|
September 20, 2023
|
|
Lost the output file after two steps with stdout
|
|
1
|
404
|
September 20, 2023
|
|
Example for CWL Workflow with parallel/concurrent processing
|
|
1
|
354
|
September 5, 2023
|
|
Commandline tool for fastp generates empty report html/json
|
|
1
|
482
|
September 5, 2023
|