I am trying to write CWL for the tool rMATS. It uses files with list of fastq/BAM as input.
--s1 s1.txt A text file contains FASTQ file(s) for the sample_1.(Only if using fastq) --s2 s2.txt A text file contains FASTQ file(s) for the sample_2.(Only if using fastq)
Could anyone please show me how to mount these fastq files when using docker?