We’re trying to use the CWL tool to run AI workflows within a digital pathology use case and verify options to generate compliant provenance information with CWL.
Our scripts do not use absolute paths to input/output datasets but rather consume several parameters used by our script to build a path internally. Is there a way to indicate this in CWL? With the thing being that we do not know the exact paths beforehand, but we know the logic of how they are created.
Thanks very much for any answers in advance