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Tee for stdout/stderr capture
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1
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438
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January 13, 2023
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Cwltool extract inputs
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1
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354
|
January 3, 2023
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How to read a string from a txt file and wrap it as a CWLype object?
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2
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414
|
January 2, 2023
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Install python modules when running cwl
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2
|
596
|
December 14, 2022
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Software & libraries to help with development and testing of CWL workflows
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1
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439
|
December 14, 2022
|
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Running multiple scripts via baseCommand
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1
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576
|
December 13, 2022
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Preserving /tmp directory structure
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5
|
611
|
December 2, 2022
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Cannot get `cwltool` to run with `--podman` when step has `DockerRequirement`
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7
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850
|
December 1, 2022
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Wget CommandLineTool works with v1.0 but not with v1.2
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2
|
605
|
November 24, 2022
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Conformance tests are failing for a certain CWL runner
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8
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433
|
November 2, 2022
|
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Override Docker entrypoint in Command Line Tool
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1
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733
|
October 31, 2022
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Using udocker for CWL Workflows
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1
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382
|
October 20, 2022
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Use alias to avoid having duplicate run IDs?
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1
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530
|
October 18, 2022
|
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How to pass extra switch to docker run command
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5
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684
|
October 17, 2022
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How to implement a "Reduce" method in CWL?
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2
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669
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February 10, 2021
|
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List of input files in external yaml file
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3
|
754
|
September 30, 2022
|
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Citing Common Workflow Language
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5
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606
|
September 12, 2022
|
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Making an input type: File writable
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5
|
694
|
September 8, 2022
|
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`cwl-runner` when installing `cwltool` via conda
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2
|
521
|
September 7, 2022
|
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What is the purpose of `id` and `label` fields on CommandLineTool
|
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1
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313
|
August 29, 2022
|
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Avoiding repetitive expressions for output binding in CommandLineTool
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2
|
524
|
August 29, 2022
|
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Explicit glob output not parsed for CommandLineTool with default value
|
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2
|
637
|
July 17, 2022
|
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Running Docker as Root in CommandLineTool
|
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3
|
821
|
July 13, 2022
|
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Calling Subworkflow from another file
|
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3
|
449
|
July 10, 2022
|
|
Loop requirement implementation
|
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6
|
1160
|
July 1, 2022
|
|
Representing and implementing "foreign" workflows
|
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2
|
496
|
June 30, 2022
|
|
Repository of Workflow examples
|
|
1
|
538
|
June 28, 2022
|
|
CWL draft-3 document upgrade
|
|
3
|
635
|
June 9, 2022
|
|
Docker error: invalid mount config for type "bind"
|
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2
|
3949
|
May 16, 2022
|
|
shellQuote value as input parameter
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3
|
630
|
April 8, 2022
|