|
Set tool output format string from workflow inputs
|
|
11
|
1059
|
January 20, 2022
|
|
On-the-fly document resolving
|
|
1
|
529
|
January 15, 2022
|
|
Scatter and collect stdout per scattered input
|
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4
|
841
|
January 5, 2022
|
|
Create/Move output of a tool to a specific location
|
|
9
|
2554
|
December 6, 2021
|
|
Extract File + SecondaryFiles by ExpressionTool
|
|
1
|
591
|
November 24, 2021
|
|
Can't find asdf python installation
|
|
2
|
1563
|
November 16, 2021
|
|
Singularity not found but installed
|
|
1
|
918
|
November 12, 2021
|
|
Deferred input for scattered subworkflow?
|
|
2
|
747
|
November 12, 2021
|
|
$include instead of $import for run:?
|
|
1
|
493
|
November 11, 2021
|
|
Connect path output (from a tool stdout) to a File input
|
|
3
|
689
|
October 28, 2021
|
|
ERROR Tool definition failed validation
|
|
1
|
861
|
October 18, 2021
|
|
Intermediary outputs are not deleted after workflow completion
|
|
3
|
637
|
October 18, 2021
|
|
Best practice for passing in credentials/secrets to docker container
|
|
2
|
953
|
October 18, 2021
|
|
DockerRequirement vs ContainerRequirement
|
|
2
|
496
|
October 7, 2021
|
|
Using `Directory` as an output type
|
|
1
|
518
|
October 7, 2021
|
|
Docker: Error response from daemon: invalid mount config for type "bind": bind source path does not exist: /tmp/n8phn0ef
|
|
1
|
1915
|
October 4, 2021
|
|
Cwl-runner - tmpdir not deleted
|
|
9
|
1239
|
October 3, 2021
|
|
Running steps conditional on output files not existing
|
|
2
|
529
|
October 2, 2021
|
|
Working offline with singularity
|
|
18
|
2393
|
September 30, 2021
|
|
How do you import a remote document using https?
|
|
2
|
605
|
September 30, 2021
|
|
Relative file hierarchy not preserved with respect to cwltool "--outdir"
|
|
2
|
519
|
September 28, 2021
|
|
Interactive CWL workflows (e.g. pop-up to ask user as a step)
|
|
1
|
432
|
September 27, 2021
|
|
Problems with Records not behaving as intended or passing to baseCommand
|
|
11
|
648
|
September 22, 2021
|
|
Custom docker invocation
|
|
1
|
516
|
September 20, 2021
|
|
Cwl-runner and podman
|
|
7
|
1304
|
September 10, 2021
|
|
Could it happen that a cwl created in a different editor is not correctly parsed in rabix composer?
|
|
1
|
302
|
September 8, 2021
|
|
Specifying a relative directory for all outputs
|
|
1
|
645
|
September 7, 2021
|
|
Creating the scatter array using inputs
|
|
2
|
459
|
September 7, 2021
|
|
Scatter workflow: Calling cwl actors sequentially rather than when sufficient input is present
|
|
1
|
531
|
September 6, 2021
|
|
Error Handling For a Scatter Workflow
|
|
1
|
474
|
September 6, 2021
|