|
Beginner's question: stdin from generated file
|
|
2
|
490
|
June 4, 2021
|
|
Cwltool --pack "invalid field inputBinding"
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2
|
759
|
June 2, 2021
|
|
Supressing stdout from noisy step in workflow
|
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2
|
450
|
June 1, 2021
|
|
Cwl_utils Parser Hints vs Requirements
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2
|
561
|
May 28, 2021
|
|
WDL 2 CWL Conversions
|
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1
|
553
|
May 28, 2021
|
|
How to iterate over input file array from arguments -> valueFrom
|
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4
|
1874
|
May 19, 2021
|
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Output Filenames are URL Encoded
|
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1
|
467
|
May 18, 2021
|
|
"While"-style reccurent step (feature request ?)
|
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1
|
554
|
April 18, 2021
|
|
Forcing stdout and stderr to be written when a tool fails
|
|
6
|
939
|
April 9, 2021
|
|
Using floats / decimals as integers in a workflow and vice versa
|
|
3
|
679
|
March 30, 2021
|
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CWL input files as secondaryFiles JS
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|
1
|
480
|
March 22, 2021
|
|
Submit job on remote cluster
|
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6
|
726
|
March 5, 2021
|
|
Secondary files cannot be collected by cwltool on Windows 10
|
|
2
|
927
|
March 5, 2021
|
|
dockerImageId can not be known before dockerFile build
|
|
1
|
560
|
March 5, 2021
|
|
Singularity temp folder
|
|
1
|
1122
|
March 5, 2021
|
|
Cwl-runner vs cromwell run : Different outputs behavior
|
|
1
|
669
|
March 5, 2021
|
|
dockerPull : hostname and port?
|
|
1
|
439
|
March 5, 2021
|
|
How to specify a list of directory in InputWorkDirRequirement
|
|
2
|
1284
|
March 5, 2021
|
|
Dealing with huge inputs in CWL for an AI use case
|
|
4
|
506
|
March 5, 2021
|
|
What is the best way to ingest a directory of FASTQ paired-end files
|
|
1
|
366
|
March 5, 2021
|
|
Unable to retain cache/tmp dir
|
|
1
|
380
|
March 2, 2021
|
|
Building CWL tool for FindBadGenomicKmers
|
|
2
|
538
|
February 26, 2021
|
|
Gather file array into one argument in CommandlineTool
|
|
1
|
360
|
February 26, 2021
|
|
Array arguments appears differently between cwl-runner and cromwell, why?
|
|
1
|
349
|
February 26, 2021
|
|
Generating array parameters for scatter
|
|
1
|
442
|
February 26, 2021
|
|
Scatter parameter error?
|
|
1
|
471
|
February 22, 2021
|
|
CommandOutputParameter - regex
|
|
4
|
682
|
February 16, 2021
|
|
Inter steps output dependencies difficulties
|
|
8
|
397
|
February 15, 2021
|
|
CommandOutputParameter - mathematical evaluation and assignment
|
|
2
|
365
|
February 15, 2021
|
|
WorkflowStepInput - calculation and assignment
|
|
1
|
354
|
February 15, 2021
|