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Cwltool factory invocation yields subdirectories with symlink listings
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3
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494
|
June 15, 2021
|
|
How to use cwljava to generate CWL files
|
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2
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538
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June 10, 2021
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Use float as input, "massage" to a string
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2
|
461
|
June 8, 2021
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Providing input to a step that expects record input fields
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1
|
568
|
June 7, 2021
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Best practice for divvying up functionality among Command Line Tools
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2
|
330
|
June 7, 2021
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Beginner's question: stdin from generated file
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2
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460
|
June 4, 2021
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Cwltool --pack "invalid field inputBinding"
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2
|
745
|
June 2, 2021
|
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Supressing stdout from noisy step in workflow
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2
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412
|
June 1, 2021
|
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Cwl_utils Parser Hints vs Requirements
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2
|
539
|
May 28, 2021
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WDL 2 CWL Conversions
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|
1
|
526
|
May 28, 2021
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How to iterate over input file array from arguments -> valueFrom
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4
|
1832
|
May 19, 2021
|
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Output Filenames are URL Encoded
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1
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456
|
May 18, 2021
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|
"While"-style reccurent step (feature request ?)
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|
1
|
531
|
April 18, 2021
|
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Forcing stdout and stderr to be written when a tool fails
|
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6
|
914
|
April 9, 2021
|
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Using floats / decimals as integers in a workflow and vice versa
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|
3
|
666
|
March 30, 2021
|
|
CWL input files as secondaryFiles JS
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|
1
|
468
|
March 22, 2021
|
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Submit job on remote cluster
|
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6
|
670
|
March 5, 2021
|
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Secondary files cannot be collected by cwltool on Windows 10
|
|
2
|
901
|
March 5, 2021
|
|
dockerImageId can not be known before dockerFile build
|
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1
|
545
|
March 5, 2021
|
|
Singularity temp folder
|
|
1
|
1071
|
March 5, 2021
|
|
Cwl-runner vs cromwell run : Different outputs behavior
|
|
1
|
656
|
March 5, 2021
|
|
dockerPull : hostname and port?
|
|
1
|
432
|
March 5, 2021
|
|
How to specify a list of directory in InputWorkDirRequirement
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2
|
1249
|
March 5, 2021
|
|
Dealing with huge inputs in CWL for an AI use case
|
|
4
|
460
|
March 5, 2021
|
|
What is the best way to ingest a directory of FASTQ paired-end files
|
|
1
|
345
|
March 5, 2021
|
|
Unable to retain cache/tmp dir
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|
1
|
357
|
March 2, 2021
|
|
Building CWL tool for FindBadGenomicKmers
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|
2
|
518
|
February 26, 2021
|
|
Gather file array into one argument in CommandlineTool
|
|
1
|
350
|
February 26, 2021
|
|
Array arguments appears differently between cwl-runner and cromwell, why?
|
|
1
|
336
|
February 26, 2021
|
|
Generating array parameters for scatter
|
|
1
|
426
|
February 26, 2021
|