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Reading filenames from another file in the runtime and treating them as files
|
|
1
|
388
|
February 5, 2021
|
|
Relation to BPMN
|
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4
|
1471
|
February 5, 2021
|
|
Visualization Recommendations
|
|
2
|
485
|
February 2, 2021
|
|
Does CWL work with rootless docker?
|
|
8
|
887
|
January 21, 2021
|
|
Connecting a File output to a File[] input
|
|
2
|
471
|
January 19, 2021
|
|
Cwl GATK GenotypeGVCFs error in linux due to quotes in filenames
|
|
1
|
461
|
December 11, 2020
|
|
ExpressionTool with Record output
|
|
1
|
794
|
November 26, 2020
|
|
Accessing record fields in inputs/outputs without expressions
|
|
6
|
1240
|
November 26, 2020
|
|
PubSeq COVID19 resource
|
|
0
|
338
|
November 25, 2020
|
|
Gathering files into folder for output inside Scatter
|
|
1
|
691
|
November 19, 2020
|
|
Specifying staging or temporary inside CWL script
|
|
4
|
899
|
November 15, 2020
|
|
Collect files/folders even if some steps of workflow fail
|
|
3
|
927
|
November 12, 2020
|
|
HaplotypeCallerSpark
|
|
4
|
516
|
November 11, 2020
|
|
Can you convert an input string into a File or Directory input?
|
|
3
|
1366
|
October 20, 2020
|
|
Moving bio-cwl-tools forward
|
|
1
|
687
|
October 7, 2020
|
|
Developing personas and pathways for a diverse and inclusive CWL
|
|
2
|
520
|
October 6, 2020
|
|
Best practice when specifying Java RAM requirement
|
|
7
|
547
|
October 6, 2020
|
|
When a string is a character, it can't be enclosed in quotes
|
|
3
|
652
|
October 6, 2020
|
|
How to specify that at least one of a group of parameters is necessary
|
|
1
|
505
|
October 5, 2020
|
|
An example "glue script" in CWL
|
|
3
|
604
|
September 29, 2020
|
|
Input arguments in specific position
|
|
2
|
583
|
September 29, 2020
|
|
Move files and folders to a given directory
|
|
1
|
489
|
September 27, 2020
|
|
Cwltool: flag to disable download to local file system
|
|
3
|
491
|
September 22, 2020
|
|
Packaging a CWL workflow as a tool
|
|
2
|
846
|
September 17, 2020
|
|
Get file in Directory
|
|
2
|
677
|
September 15, 2020
|
|
Suggestion: default: in CommandInputParameter should allow expressions
|
|
1
|
460
|
September 11, 2020
|
|
Conditional in workflow error
|
|
4
|
1322
|
August 21, 2020
|
|
Cwl: pass array of elements with repeated input flags
|
|
1
|
819
|
August 17, 2020
|
|
Print out commands in workflow without running them
|
|
2
|
564
|
August 14, 2020
|
|
Scattering with a directory to store all outputs
|
|
15
|
1874
|
July 10, 2020
|