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Packaging a CWL workflow as a tool
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|
2
|
852
|
September 17, 2020
|
|
Get file in Directory
|
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2
|
679
|
September 15, 2020
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Suggestion: default: in CommandInputParameter should allow expressions
|
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1
|
460
|
September 11, 2020
|
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Conditional in workflow error
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4
|
1322
|
August 21, 2020
|
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Cwl: pass array of elements with repeated input flags
|
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1
|
821
|
August 17, 2020
|
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Print out commands in workflow without running them
|
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2
|
567
|
August 14, 2020
|
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Scattering with a directory to store all outputs
|
|
15
|
1883
|
July 10, 2020
|
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Cwltool as module - Factory with provenance
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0
|
486
|
July 10, 2020
|
|
How to specify that an input file can be one of several formats?
|
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3
|
493
|
July 2, 2020
|
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Passing slurm job parameters
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4
|
979
|
July 2, 2020
|
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InitialWorkDirRequirement create config file with tabs and new line chars
|
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3
|
535
|
July 2, 2020
|
|
Is CWL compatible with PowerShell?
|
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1
|
454
|
June 19, 2020
|
|
Scatter workflow step n times
|
|
6
|
1432
|
June 8, 2020
|
|
Error while developing FindBadGenomicKmers.cwl
|
|
2
|
639
|
May 30, 2020
|
|
Building CWL tools for BadGenomicsKmers
|
|
0
|
498
|
May 28, 2020
|
|
Build and debug samtools_mpileup.cwl
|
|
7
|
855
|
May 27, 2020
|
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How to stage secondary files for baseCommand?
|
|
4
|
1247
|
May 27, 2020
|
|
Multiline commands in a single tool
|
|
1
|
882
|
May 26, 2020
|
|
Input array of multiple types
|
|
1
|
541
|
May 26, 2020
|
|
Stdout and log file
|
|
2
|
992
|
May 12, 2020
|
|
Is the order of outputs after a scatter guaranteed?
|
|
1
|
707
|
May 11, 2020
|
|
Validate a CommandLineTool in-memory
|
|
1
|
411
|
May 4, 2020
|
|
Cwl-runner does not rebuild Docker image
|
|
2
|
638
|
May 4, 2020
|
|
Mounting specific output directory
|
|
3
|
1312
|
May 1, 2020
|
|
Merging 2 python workflows with $PWD
|
|
2
|
579
|
April 28, 2020
|
|
Workflow JSON output to workflow array of arrays input
|
|
1
|
839
|
March 30, 2020
|
|
How mount paths in file argument when using docker?
|
|
3
|
589
|
March 27, 2020
|
|
Ask CWL to rename a secondary file
|
|
5
|
1793
|
March 25, 2020
|
|
CWL - glob an array of output files based on a single input string
|
|
1
|
1295
|
March 19, 2020
|
|
Cwltool version
|
|
2
|
485
|
March 19, 2020
|