Building CWL tools for BadGenomicsKmers
|
|
0
|
489
|
May 28, 2020
|
Build and debug samtools_mpileup.cwl
|
|
7
|
852
|
May 27, 2020
|
How to stage secondary files for baseCommand?
|
|
4
|
1207
|
May 27, 2020
|
Multiline commands in a single tool
|
|
1
|
851
|
May 26, 2020
|
Input array of multiple types
|
|
1
|
534
|
May 26, 2020
|
Stdout and log file
|
|
2
|
978
|
May 12, 2020
|
Is the order of outputs after a scatter guaranteed?
|
|
1
|
696
|
May 11, 2020
|
Validate a CommandLineTool in-memory
|
|
1
|
402
|
May 4, 2020
|
Cwl-runner does not rebuild Docker image
|
|
2
|
634
|
May 4, 2020
|
Mounting specific output directory
|
|
3
|
1301
|
May 1, 2020
|
Merging 2 python workflows with $PWD
|
|
2
|
565
|
April 28, 2020
|
Workflow JSON output to workflow array of arrays input
|
|
1
|
829
|
March 30, 2020
|
How mount paths in file argument when using docker?
|
|
3
|
585
|
March 27, 2020
|
Ask CWL to rename a secondary file
|
|
5
|
1774
|
March 25, 2020
|
CWL - glob an array of output files based on a single input string
|
|
1
|
1289
|
March 19, 2020
|
Cwltool version
|
|
2
|
483
|
March 19, 2020
|
Conflict name using mothur
|
|
5
|
533
|
March 9, 2020
|
Variable output file types
|
|
2
|
392
|
February 13, 2020
|
Failed to create directory in the default staging directory inside Docker
|
|
1
|
806
|
February 13, 2020
|
Proper syntax for type paths
|
|
2
|
455
|
February 11, 2020
|
How to remove a file in the input directory?
|
|
4
|
672
|
January 28, 2020
|
Running with toil cwl how to interpret the stats?
|
|
6
|
750
|
November 19, 2019
|
Passing reference or whole directory as input?
|
|
2
|
1787
|
November 4, 2019
|
Issues with running the workflow with toil-cwl-runner but not with cwltool
|
|
2
|
1000
|
October 31, 2019
|
How can I expression an optional record with required fields
|
|
3
|
888
|
October 28, 2019
|
Does a listing support arrays of arrays?
|
|
7
|
1316
|
October 24, 2019
|
Apply basename to an array on input file
|
|
1
|
903
|
October 24, 2019
|
Output in the format of an input schema
|
|
1
|
351
|
October 16, 2019
|
Default in workflow and subworkflow
|
|
1
|
415
|
September 21, 2019
|
Dependent inputs in a workflow
|
|
1
|
470
|
September 3, 2019
|